98 lines
1.6 KiB
Markdown
98 lines
1.6 KiB
Markdown
# Newick Format
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- Format to represent trees with distances and branch names
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# Examples
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Printed using DendroPY options
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`show_internal_node_labels = True`, `width=40`, `plot_metric="length"`.
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## Single Descendant
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```
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(B)A;
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```
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```
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A------------------------------------- B
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```
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## Two Descendants
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```
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(B,C)A;
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```
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```
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/------------------------------------- B
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A
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\------------------------------------- C
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```
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## Two Levels Of Descendants
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```
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((D,E)B,(F,G)C)A;
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```
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```
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/------------------ D
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/------------------B
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| \------------------ E
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A
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| /------------------ F
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\------------------C
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\------------------ G
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```
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## Distances
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```
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(A:1,B:2);
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```
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```
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/------------------ A
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@
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\------------------------------------- B
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```
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## Big Example
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```
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(
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(
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(
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(
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Dasyatis_laosensis:0.00864712,
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Hemitrygon_akajei:0.02501331
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):0.00555551,
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Dasyatis_sp._TT:0.01190329
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):0.07844344,
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Maculabatis_gerrardi:0.10443933
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):0.03362855,
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(
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Aetobatus_flagellum:0.06712780,
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(
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Aetobatus_narinari:0.00190402,
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Aetobatus_ocellatus:0.00159879
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):0.05608476
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):0.06364667,
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Squatina_squatina:0.24404039
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);
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```
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```
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/Dasyatis laosensis
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/@
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/-----@\- Hemitrygon akajei
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/-@ \ Dasyatis sp. TT
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| \------- Maculabatis gerrardi
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| /----- Aetobatus flagellum
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@---@
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| | /Aetobatus narinari
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| \----@
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| \Aetobatus ocellatus
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\------------------ Squatina squatina
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```
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