Finish out unikonta

amoebozoa.md

@@ -0,0 +1,3 @@
+# Amoebozoa
+
+- Large, unicellular, free-living, and parasitic

archaeplastida.md

@@ -0,0 +1,14 @@
+# Archaeplastida
+
+- Original [[eukaryotic]] phototrophe, first to take in a [[cyanobacterium]] as
+an organelle
+- Two lineages:
+  - [[Rhodoyhpta]]: Adapted to deeper water by having pigments more absorbant
+  of blues
+  - [[Viridaeplantae]]: Includes the bulk of the Archaeplastida, including the
+  [[Chlorophyta]] and the [[Streptophyta]]
+
+[//begin]: # "Autogenerated link references for markdown compatibility"
+[eukaryotic]: eukarya "Eukarya"
+[cyanobacterium]: cyanobacteria "Cyanobacteria"
+[//end]: # "Autogenerated link references"

bacteria.md

@@ -3,7 +3,7 @@
 - Bacterial flagellum
   - Most commonly, one flagellum creates a "run and twiddle" movement where
   bacteria can achieve [[chemotaxis]]
-  - [[Spirochaeota]] have their flagellum throughout the inside of the cell,
+  - [[Spirochaeta]] have their flagellum throughout the inside of the cell,
   which allows movement through viscous materials
 - By default, bacteria are Gram-negative, except for [[Fermicutes]]:
 Gram-negative bacteria form a [[symplesiomorphy]]
@@ -15,7 +15,7 @@ Gram-negative bacteria form a [[symplesiomorphy]]
     - [[Cyanobacteria]]
     - [[Fermicutes]] (Gram-positive bacteria)
   - [[Hydrobacteria]]
-    - [[Spirochaeota]]
+    - [[Spirochaeta]]
     - Proteo-Plancto MRCA
       - [[Proteobacteria]]
       - [[Planctobacteria]]
@@ -23,7 +23,7 @@ Gram-negative bacteria form a [[symplesiomorphy]]
 
 [//begin]: # "Autogenerated link references for markdown compatibility"
 [chemotaxis]: chemotaxis "Chemotaxis"
-[Spirochaeota]: spirochaeota "Spirochaeota"
+[Spirochaeta]: spirochaeta "Spirochaeta"
 [Fermicutes]: fermicutes "Fermicutes"
 [Bacteria]: bacteria "Bacteria"
 [Cyanobacteria]: cyanobacteria "Cyanobacteria"

eukarya.md

@@ -38,24 +38,24 @@ which is evidence for [[Endosymbiosis]]
             - [[Oomycota]]
             - [[Brown algae]]
       - [[Archaeplastida]]
-        - Red algae
-        - Viridiplantae
-          - Chlorophyta
-          - Streptophyta
+        - [[Rhodoyhpta]] (red algae)
+        - [[Viridiplantae]]
+          - [[Chlorophyta]]
+          - [[Streptophyta]]
             - Charophyta
-            - Embryophyta (land plants)
+            - [[Embryophyta]] (land plants)
   - [[Unikonta]]
-    - Amoebozoa
+    - [[Amoebozoa]]
       - Tubulinea
       - Entamoeba
-      - Eumycetozoa (slime molds)
-    - Opisthokonta
+      - [[Eumycetozoa]] (slime molds)
+    - [[Opisthokonta]]
       - Holomycota
         - Nucleariida
-        - Fungi
+        - [[Fungi]]
       - Holozoa
         - Choanoflagellatea
-        - Animalia
+        - [[Animalia]]
 
 [//begin]: # "Autogenerated link references for markdown compatibility"
 [Endosymbiosis]: endosymbiosis "Endosymbiosis"
@@ -75,4 +75,10 @@ which is evidence for [[Endosymbiosis]]
 [Diatoms]: diatoms "Diatoms"
 [Oomycota]: oomycota "Oomycota"
 [Brown algae]: brown-algae "Brown algae"
+[Archaeplastida]: archaeplastida "Archaeplastida"
+[Unikonta]: unikonta "Unikonta"
+[Amoebozoa]: amoebozoa "Amoebozoa"
+[Eumycetozoa]: eumycetozoa "Eumycetozoa"
+[Opisthokonta]: opisthokonta "Opisthokonta"
+[Fungi]: fungi "Fungi"
 [//end]: # "Autogenerated link references"

eumycetozoa.md

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+# Eumycetozoa
+
+- Also known as "slime molds"
+- "Plasmodial" acellular slime molds
+- Cellular slime molds

fungi.md

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+# Fungi
+
+- It used to be presumed that [[Fungi]] were more [[Embryophyta]]-like than
+[[Animalia]]-like, because of their plant-like structure and cell wall, but
+this is not the case
+  - It was eventually shown that the [[Chytridiomycota]] was a member of the
+  [[Opisthokonta]]
+
+## Taxonomy
+
+- [[Fungi]]
+  - [[Chytridiomycota]]
+  - Amastigomycota
+    - [[Glomeromycota]]
+    - Dikarya
+      - [[Ascomycota]]
+      - [[Basidiomycota]]
+
+[//begin]: # "Autogenerated link references for markdown compatibility"
+[Fungi]: fungi "Fungi"
+[Opisthokonta]: opisthokonta "Opisthokonta"
+[//end]: # "Autogenerated link references"

opisthokonta.md

@@ -0,0 +1,10 @@
+# Opisthokonta
+
+- Part of the [[Unikonta]]
+- Named from "rear pole"
+- Having a back-attaching flagellum is rare among [[Eukarya]]
+
+[//begin]: # "Autogenerated link references for markdown compatibility"
+[Unikonta]: unikonta "Unikonta"
+[Eukarya]: eukarya "Eukarya"
+[//end]: # "Autogenerated link references"

parabasalia.md

@@ -16,5 +16,5 @@
 [//begin]: # "Autogenerated link references for markdown compatibility"
 [Metamonada]: metamonada "Metamonada"
 [Excavata]: excavata "Excavata"
-[spirochetes]: spirochaeota "Spirochaeota"
+[spirochetes]: spirochaeta "Spirochaeta"
 [//end]: # "Autogenerated link references"

protista.md

@@ -0,0 +1,9 @@
+# Protista
+
+- Not a valid taxon, as it is a [[paraphyly]]
+- Refers to all [[Eukarya]] that are _not_ [[Animalia]], [[Embryophyta]], or
+[[Fungi]]
+
+[//begin]: # "Autogenerated link references for markdown compatibility"
+[Eukarya]: eukarya "Eukarya"
+[//end]: # "Autogenerated link references"

spirochaeta.md

@@ -1,4 +1,4 @@
-# Spirochaeota
+# Spirochaeta
 
 - Free-living and parasitic
 - Includes agents of [[syphilis]] and [[Lyme disease]]

unikonta.md

@@ -0,0 +1,4 @@
+# Unikonta
+
+- Named from "one pole"
+- Having a single flagellum is rare among cellular organisms